5YW0

Crystal structure of the Kdo hydroxylase KdoO, a non-heme Fe(II) alphaketoglutarate dependent dioxygenase in complex with succinate and Fe(III)

Summary for 5YW0

Entry DOI	10.2210/pdb5yw0/pdb
Related	5Y9Y 5YVZ
Descriptor	Uncharacterized protein KdoO, TETRAETHYLENE GLYCOL, FE (III) ION, ... (7 entities in total)
Functional Keywords	fe(ii)/o2/alphaketoglutarate dependent dioxygenase, kdo2-lipid a dioxygenase, deoxysugar dioxygenase, lps biosynthesis, biosynthetic protein
Biological source	Methylacidiphilum infernorum (isolate V4)
Total number of polymer chains	1
Total formula weight	37712.65
Authors	Chung, H.S.,Pemble, C.W.,Joo, S.H.,Raetz, C.R. (deposition date: 2017-11-28, release date: 2018-09-05, Last modification date: 2024-03-27)
Primary citation	Joo, S.H.,Pemble, C.W.,Yang, E.G.,Raetz, C.R.H.,Chung, H.S. Biochemical and Structural Insights into an Fe(II)/ alpha-Ketoglutarate/O2-Dependent Dioxygenase, Kdo 3-Hydroxylase (KdoO). J. Mol. Biol., 430:4036-4048, 2018 Cited by PubMed: 30092253 DOI: 10.1016/j.jmb.2018.07.029 PDB entries with the same primary citation
Experimental method	X-RAY DIFFRACTION (1.49 Å)

Structure validation