5XS7

Structure of Coxsackievirus A6 (CVA6) virus A-particle in complex with the neutralizing antibody fragment 1D5

Summary for 5XS7

EMDB information6757
DescriptorLight chain of Fab 1D5, Heavy chain of Fab 1D5, Genome polyprotein, ... (5 entities in total)
Functional Keywordscoxsackievirus a6, immune-complex, icosahedral, virus
Biological sourceMus musculus
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Cellular locationHost cytoplasmic vesicle membrane ; Peripheral membrane protein ; Cytoplasmic side . Virion  A0A0K2BNC7 A0A0K2BNC7 A0A0K2BNC7
Total number of polymer chains5
Total molecular weight112975.76
Authors
Zheng, Q.B.,He, M.Z.,Xu, L.F.,Yu, H.,Li, S.W.,Cheng, T. (deposition date: 2017-06-12, release date: 2017-09-27)
Primary citation
Xu, L.,Zheng, Q.,Li, S.,He, M.,Wu, Y.,Li, Y.,Zhu, R.,Yu, H.,Hong, Q.,Jiang, J.,Li, Z.,Li, S.,Zhao, H.,Yang, L.,Hou, W.,Wang, W.,Ye, X.,Zhang, J.,Baker, T.S.,Cheng, T.,Zhou, Z.H.,Yan, X.,Xia, N.
Atomic structures of Coxsackievirus A6 and its complex with a neutralizing antibody
Nat Commun, 8:505-505, 2017
PubMed: 28894095 (PDB entries with the same primary citation)
DOI: 10.1038/s41467-017-00477-9
MImport into Mendeley
Experimental method
ELECTRON MICROSCOPY
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Structure validation

ClashscoreRamachandran outliersSidechain outliers90.4%0MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all EM structures

More Asymmetric unit images

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Molmil generated image of 5xs7
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Molmil generated image of 5xs7
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More Biological unit images

Molmil generated image of 5xs7
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Molmil generated image of 5xs7
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Molmil generated image of 5xs7
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(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (5xs7.pdb1.gz [7.96 MB])