Crystal structure of 60-mer BFDV Capsid Protein in complex with single stranded DNA

Summary for 5J37

Related5J36 5J09
DescriptorBeak and feather disease virus capsid protein, single stranded DNA, PHOSPHATE ION, ... (4 entities in total)
Functional Keywordsbfdv virus capsid jelly roll, viral protein, virus-dna complex, virus/dna
Biological sourceBeak and feather disease virus (BFDV)
Total number of polymer chains10
Total molecular weight197190.66
Sarker, S.,Raidal, S.,Aragao, D.,Forwood, J.K. (deposition date: 2016-03-30, release date: 2016-05-04, Last modification date: 2016-10-12)
Primary citation
Sarker, S.,Terron, M.C.,Khandokar, Y.,Aragao, D.,Hardy, J.M.,Radjainia, M.,Jimenez-Zaragoza, M.,de Pablo, P.J.,Coulibaly, F.,Luque, D.,Raidal, S.R.,Forwood, J.K.
Structural insights into the assembly and regulation of distinct viral capsid complexes.
Nat Commun, 7:13014-13014, 2016
PubMed: 27698405 (PDB entries with the same primary citation)
DOI: 10.1038/ncomms13014
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.198100.6%0.9%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution