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5IRY

Crystal structure of human Desmocollin-1 ectodomain

5IRY の概要
エントリーDOI10.2210/pdb5iry/pdb
分子名称Desmocollin-1, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... (7 entities in total)
機能のキーワードextracellular cadherin domain, cell adhesion, desmosome, cell surface
由来する生物種Homo sapiens (Human)
タンパク質・核酸の鎖数2
化学式量合計127246.58
構造登録者
Brasch, J.,Harrison, O.J.,Shapiro, L. (登録日: 2016-03-15, 公開日: 2016-06-22, 最終更新日: 2024-10-23)
主引用文献Harrison, O.J.,Brasch, J.,Lasso, G.,Katsamba, P.S.,Ahlsen, G.,Honig, B.,Shapiro, L.
Structural basis of adhesive binding by desmocollins and desmogleins.
Proc.Natl.Acad.Sci.USA, 113:7160-7165, 2016
Cited by
PubMed Abstract: Desmosomes are intercellular adhesive junctions that impart strength to vertebrate tissues. Their dense, ordered intercellular attachments are formed by desmogleins (Dsgs) and desmocollins (Dscs), but the nature of trans-cellular interactions between these specialized cadherins is unclear. Here, using solution biophysics and coated-bead aggregation experiments, we demonstrate family-wise heterophilic specificity: All Dsgs form adhesive dimers with all Dscs, with affinities characteristic of each Dsg:Dsc pair. Crystal structures of ectodomains from Dsg2 and Dsg3 and from Dsc1 and Dsc2 show binding through a strand-swap mechanism similar to that of homophilic classical cadherins. However, conserved charged amino acids inhibit Dsg:Dsg and Dsc:Dsc interactions by same-charge repulsion and promote heterophilic Dsg:Dsc interactions through opposite-charge attraction. These findings show that Dsg:Dsc heterodimers represent the fundamental adhesive unit of desmosomes and provide a structural framework for understanding desmosome assembly.
PubMed: 27298358
DOI: 10.1073/pnas.1606272113
主引用文献が同じPDBエントリー
実験手法
X-RAY DIFFRACTION (3.095 Å)
構造検証レポート
Validation report summary of 5iry
検証レポート(詳細版)ダウンロードをダウンロード

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件を2025-06-11に公開中

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