5DZG

Crystal Structure of the catalytic nucleophile mutant of VvEG16 in complex with a xyloglucan tetradecasaccharide

Summary for 5DZG

• Entry DOI: 10.2210/pdb5dzg/pdb
• Related: 5DZE 5DZF
• Descriptor: VvEG16, endo-glucanase, alpha-D-xylopyranose-(1-6)-beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose, alpha-D-xylopyranose-(1-6)-beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ... (4 entities in total)
• Functional Keywords: cell wall, dietary fiber, mixed-linkage glucan, xyloglucan, beta-glucan, glycoside hydrolase, endo-glucanase, grapes, plants, protein structure, gh16, beta-jelly roll, phylogeny, hydrolase
• Biological source: Vitis vinifera (Grape)
• Total number of polymer chains: 2
• Total formula weight: 49958.86

Authors

McGregor, N.G.S.,Tung, C.C.,Van Petegem, F.,Brumer, H. (deposition date: 2015-09-25, release date: 2016-09-21, Last modification date: 2023-09-27)

• Primary citation: McGregor, N.,Yin, V.,Tung, C.C.,Van Petegem, F.,Brumer, H.; Crystallographic insight into the evolutionary origins of xyloglucan endotransglycosylases and endohydrolases.; Plant J., 89:651-670, 2017; PubMed: 27859885; DOI: 10.1111/tpj.13421

Experimental method

X-RAY DIFFRACTION (1.79 Å)