5D4H

High-resolution nitrite complex of a copper nitrite reductase determined by synchrotron radiation crystallography

Summary for 5D4H

Related5D4I 5D4J
DescriptorCopper-containing nitrite reductase, COPPER (II) ION, NITRITE ION, ... (6 entities in total)
Functional Keywordscopper, oxidoreductase
Biological sourceAlcaligenes faecalis
Cellular locationPeriplasm P38501
Total number of polymer chains3
Total molecular weight113725.23
Authors
Primary citation
Fukuda, Y.,Tse, K.M.,Nakane, T.,Nakatsu, T.,Suzuki, M.,Sugahara, M.,Inoue, S.,Masuda, T.,Yumoto, F.,Matsugaki, N.,Nango, E.,Tono, K.,Joti, Y.,Kameshima, T.,Song, C.,Hatsui, T.,Yabashi, M.,Nureki, O.,Murphy, M.E.,Inoue, T.,Iwata, S.,Mizohata, E.
Redox-coupled proton transfer mechanism in nitrite reductase revealed by femtosecond crystallography
Proc.Natl.Acad.Sci.USA, 113:2928-2933, 2016
PubMed: 26929369 (PDB entries with the same primary citation)
DOI: 10.1073/pnas.1517770113
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.3 Å)
?

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.165301.0%1.8%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution