Nucleosome containing unmethylated Sat2R DNA

Summary for 5CPI

Related5CPJ 5CPK
DescriptorHistone H3.1, Histone H4, Histone H2A type 1-B/E, ... (6 entities in total)
Functional Keywordshistone fold, dna binding, nucleus, nucleosome, chromatin formation, dna methylation, structural protein-dna complex, structural protein/dna
Biological sourceHomo sapiens (Human)
Total number of polymer chains10
Total molecular weight202224.75
Osakabe, A.,Arimura, Y.,Adachi, F.,Maehara, K.,Ohkawa, Y.,Kurumizaka, H. (deposition date: 2015-07-21, release date: 2015-10-28, Last modification date: 2020-02-19)
Primary citation
Osakabe, A.,Adachi, F.,Arimura, Y.,Maehara, K.,Ohkawa, Y.,Kurumizaka, H.
Influence of DNA methylation on positioning and DNA flexibility of nucleosomes with pericentric satellite DNA.
Open Biology, 5:-, 2015
PubMed: 26446621 (PDB entries with the same primary citation)
DOI: 10.1098/rsob.150128
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.294220 2.4% 2.7%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload
PDB entries from 2020-10-28