Structure model of Sap1-DNA complex

Summary for 5B7J

DescriptorSwitch-activating protein 1, DNA (5'-D(*CP*AP*AP*AP*AP*CP*AP*AP*TP*AP*TP*T)-3'), DNA (5'-D(*AP*AP*TP*AP*TP*TP*GP*TP*TP*TP*TP*G)-3') (3 entities in total)
Functional Keywordsprotein, dna, interaction, complex, dna binding protein-dna complex, dna binding protein/dna
Biological sourceSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Cellular locationNucleus  P40847
Total number of polymer chains3
Total molecular weight20569.08
Jin, C.,Hu, Y.,Ding, J.,Zhang, Y. (deposition date: 2016-06-07, release date: 2017-02-22, Last modification date: 2017-05-24)
Primary citation
Guan, L.,He, P.,Yang, F.,Zhang, Y.,Hu, Y.,Ding, J.,Hua, Y.,Zhang, Y.,Ye, Q.,Hu, J.,Wang, T.,Jin, C.,Kong, D.
Sap1 is a replication-initiation factor essential for the assembly of pre-replicative complex in the fission yeast Schizosaccharomyces pombe
J. Biol. Chem., 292:6056-6075, 2017
PubMed: 28223353 (PDB entries with the same primary citation)
DOI: 10.1074/jbc.M116.767806
MImport into Mendeley
Experimental method
NMR Information

Structure validation

ClashscoreRamachandran outliersSidechain outliers17 0.9% 4.2%MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all NMR structures
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PDB entries from 2020-10-14