4ZI9

Structure of mouse clustered PcdhgA1 EC1-3

4ZI9 の概要

• エントリーDOI: 10.2210/pdb4zi9/pdb
• 関連するPDBエントリー: 4ZI8
• 分子名称: MCG133388, isoform CRA_t, CALCIUM ION (3 entities in total)
• 機能のキーワード: protocadherin, complex, membrane protein, cell adhesion
• 由来する生物種: Mus musculus (Mouse)
• タンパク質・核酸の鎖数: 2
• 化学式量合計: 71310.54

構造登録者

Nicoludis, J.M.,Lau, S.-Y.,Scharfe, C.P.I.,Marks, D.S.,Weihofen, W.A.,Gaudet, R. (登録日: 2015-04-27, 公開日: 2015-10-28, 最終更新日: 2024-10-30)

主引用文献

Nicoludis, J.M.,Lau, S.Y.,Scharfe, C.P.,Marks, D.S.,Weihofen, W.A.,Gaudet, R.
Structure and Sequence Analyses of Clustered Protocadherins Reveal Antiparallel Interactions that Mediate Homophilic Specificity.
Structure, 23:2087-2098, 2015

PubMed Abstract: Clustered protocadherin (Pcdh) proteins mediate dendritic self-avoidance in neurons via specific homophilic interactions in their extracellular cadherin (EC) domains. We determined crystal structures of EC1-EC3, containing the homophilic specificity-determining region, of two mouse clustered Pcdh isoforms (PcdhγA1 and PcdhγC3) to investigate the nature of the homophilic interaction. Within the crystal lattices, we observe antiparallel interfaces consistent with a role in trans cell-cell contact. Antiparallel dimerization is supported by evolutionary correlations. Two interfaces, located primarily on EC2-EC3, involve distinctive clustered Pcdh structure and sequence motifs, lack predicted glycosylation sites, and contain residues highly conserved in orthologs but not paralogs, pointing toward their biological significance as homophilic interaction interfaces. These two interfaces are similar yet distinct, reflecting a possible difference in interaction architecture between clustered Pcdh subfamilies. These structures initiate a molecular understanding of clustered Pcdh assemblies that are required to produce functional neuronal networks.

PubMed: 26481813
DOI: 10.1016/j.str.2015.09.005

実験手法

X-RAY DIFFRACTION (1.7 Å)