4YDN

High resolution crystal structure of human transthyretin bound to ligand and conjugates of 4-(5-(3,5-dichloro-4-hydroxyphenyl)-1,3,4-oxadiazol-2-yl)phenyl fluorosulfate

4YDN の概要

• エントリーDOI: 10.2210/pdb4ydn/pdb
• 関連するPDBエントリー: 4YDM
• 分子名称: Transthyretin, 4-[5-(3,5-dichloro-4-hydroxyphenyl)-1,3,4-oxadiazol-2-yl]phenyl sulfurofluoridate, 2,6-dichloro-4-[5-(4-hydroxyphenyl)-1,3,4-oxadiazol-2-yl]phenol, ... (4 entities in total)
• 機能のキーワード: hormone transport protein, thyroxine, retinol, transport protein
• 由来する生物種: Homo sapiens (Human)
• 細胞内の位置: Secreted: P02766
• タンパク質・核酸の鎖数: 2
• 化学式量合計: 28846.33

構造登録者

Connelly, S.,Bradbury, N.C. (登録日: 2015-02-22, 公開日: 2015-07-15, 最終更新日: 2023-09-27)

主引用文献

Baranczak, A.,Liu, Y.,Connelly, S.,Du, W.G.,Greiner, E.R.,Genereux, J.C.,Wiseman, R.L.,Eisele, Y.S.,Bradbury, N.C.,Dong, J.,Noodleman, L.,Sharpless, K.B.,Wilson, I.A.,Encalada, S.E.,Kelly, J.W.
A Fluorogenic Aryl Fluorosulfate for Intraorganellar Transthyretin Imaging in Living Cells and in Caenorhabditis elegans.
J.Am.Chem.Soc., 137:7404-7414, 2015

PubMed Abstract: Fluorogenic probes, due to their often greater spatial and temporal sensitivity in comparison to permanently fluorescent small molecules, represent powerful tools to study protein localization and function in the context of living systems. Herein, we report fluorogenic probe 4, a 1,3,4-oxadiazole designed to bind selectively to transthyretin (TTR). Probe 4 comprises a fluorosulfate group not previously used in an environment-sensitive fluorophore. The fluorosulfate functional group does not react covalently with TTR on the time scale required for cellular imaging, but does red shift the emission maximum of probe 4 in comparison to its nonfluorosulfated analogue. We demonstrate that probe 4 is dark in aqueous buffers, whereas the TTR·4 complex exhibits a fluorescence emission maximum at 481 nm. The addition of probe 4 to living HEK293T cells allows efficient binding to and imaging of exogenous TTR within intracellular organelles, including the mitochondria and the endoplasmic reticulum. Furthermore, live Caenorhabditis elegans expressing human TTR transgenically and treated with probe 4 display TTR·4 fluorescence in macrophage-like coelomocytes. An analogue of fluorosulfate probe 4 does react selectively with TTR without labeling the remainder of the cellular proteome. Studies on this analogue suggest that certain aryl fluorosulfates, due to their cell and organelle permeability and activatable reactivity, could be considered for the development of protein-selective covalent probes.

PubMed: 26051248
DOI: 10.1021/jacs.5b03042

実験手法

X-RAY DIFFRACTION (1.35 Å)