4WZ6

Human CFTR aa389-678 (NBD1), deltaF508 with three solubilizing mutations, bound ATP

4WZ6 の概要

• エントリーDOI: 10.2210/pdb4wz6/pdb
• 分子名称: Cystic fibrosis transmembrane conductance regulator, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... (4 entities in total)
• 機能のキーワード: atpase, hydrolase, atp/adp binding, atp binding protein
• 由来する生物種: Homo sapiens (Human)
• 細胞内の位置: Apical cell membrane ; Multi-pass membrane protein {ECO:0000269|Ref: P13569
• タンパク質・核酸の鎖数: 1
• 化学式量合計: 32915.24

構造登録者

Byrnes, L.J.,Hall, J. (登録日: 2014-11-18, 公開日: 2015-11-11, 最終更新日: 2023-09-27)

主引用文献

Hall, J.D.,Wang, H.,Byrnes, L.J.,Shanker, S.,Wang, K.,Efremov, I.V.,Chong, P.A.,Forman-Kay, J.D.,Aulabaugh, A.E.
Binding screen for cystic fibrosis transmembrane conductance regulator correctors finds new chemical matter and yields insights into cystic fibrosis therapeutic strategy.
Protein Sci., 25:360-373, 2016

PubMed Abstract: The most common mutation in cystic fibrosis (CF) patients is deletion of F508 (ΔF508) in the first nucleotide binding domain (NBD1) of the CF transmembrane conductance regulator (CFTR). ΔF508 causes a decrease in the trafficking of CFTR to the cell surface and reduces the thermal stability of isolated NBD1; it is well established that both of these effects can be rescued by additional revertant mutations in NBD1. The current paradigm in CF small molecule drug discovery is that, like revertant mutations, a path may exist to ΔF508 CFTR correction through a small molecule chaperone binding to NBD1. We, therefore, set out to find small molecule binders of NBD1 and test whether it is possible to develop these molecules into potent binders that increase CFTR trafficking in CF-patient-derived human bronchial epithelial cells. Several fragments were identified that bind NBD1 at either the CFFT-001 site or the BIA site. However, repeated attempts to improve the affinity of these fragments resulted in only modest gains. Although these results cannot prove that there is no possibility of finding a high-affinity small molecule binder of NBD1, they are discouraging and lead us to hypothesize that the nature of these two binding sites, and isolated NBD1 itself, may not contain the features needed to build high-affinity interactions. Future work in this area may, therefore, require constructs including other domains of CFTR in addition to NBD1, if high-affinity small molecule binding is to be achieved.

PubMed: 26444971
DOI: 10.1002/pro.2821

実験手法

X-RAY DIFFRACTION (2.05 Å)