Room temperature X-ray structure of D-xylose isomerase in complex with two Mg2+ ions and L-ribulose

Summary for 4QE5

Related4QDP 4QDW 4QE1 4QE4 4QEE 4QEH
DescriptorXylose isomerase, MAGNESIUM ION, alpha-L-ribulofuranose, ... (4 entities in total)
Functional Keywordstim barrel, sugar isomerase, monosaccharides, isomerase
Biological sourceStreptomyces rubiginosus
Cellular locationCytoplasm P24300
Total number of polymer chains1
Total molecular weight43482.04
Kovalevsky, A.Y.,Langan, P. (deposition date: 2014-05-15, release date: 2014-09-03, Last modification date: 2014-09-10)
Primary citation
Langan, P.,Sangha, A.K.,Wymore, T.,Parks, J.M.,Yang, Z.K.,Hanson, B.L.,Fisher, Z.,Mason, S.A.,Blakeley, M.P.,Forsyth, V.T.,Glusker, J.P.,Carrell, H.L.,Smith, J.C.,Keen, D.A.,Graham, D.E.,Kovalevsky, A.
L-Arabinose Binding, Isomerization, and Epimerization by D-Xylose Isomerase: X-Ray/Neutron Crystallographic and Molecular Simulation Study.
Structure, 22:1287-1300, 2014
PubMed: 25132082 (PDB entries with the same primary citation)
DOI: 10.1016/j.str.2014.07.002
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.17410.3%2.3%1.8%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload