4PID

Crystal structure of human adenovirus 2 protease with a weak pyrimidine nitrile inhibitor

4PID の概要

• エントリーDOI: 10.2210/pdb4pid/pdb
• 関連するPDBエントリー: 1NLN 4PIE
• 分子名称: Protease, Pre-protein VI, ACETATE ION, ... (5 entities in total)
• 機能のキーワード: adenain, cysteine protease, adenovirus, pvic cofactor, virus maturation, hydrolase-hydrolase inhibitor complex, hydrolase/hydrolase inhibitor
• 由来する生物種: Human adenovirus 2 (HAdV-2); 詳細
• 細胞内の位置: Virion : P03252; Pre-protein VI: Host nucleus . Endosome lysis protein: Virion : P03274
• タンパク質・核酸の鎖数: 2
• 化学式量合計: 24767.29

構造登録者

Mac Sweeney, A.,Grosche, P.,Ellis, D.,Combrink, K.,Erbel, P.,Hughes, N.,Sirockin, F.,Melkko, S.,Bernardi, A.,Ramage, P.,Jarousse, N.,Altmann, E. (登録日: 2014-05-08, 公開日: 2014-09-10, 最終更新日: 2024-10-16)

主引用文献

Mac Sweeney, A.,Grosche, P.,Ellis, D.,Combrink, K.,Erbel, P.,Hughes, N.,Sirockin, F.,Melkko, S.,Bernardi, A.,Ramage, P.,Jarousse, N.,Altmann, E.
Discovery and structure-based optimization of adenain inhibitors.
Acs Med.Chem.Lett., 5:937-941, 2014

PubMed Abstract: The cysteine protease adenain is the essential protease of adenovirus and, as such, represents a promising target for the treatment of ocular and other adenoviral infections. Through a concise two-pronged hit discovery approach we identified tetrapeptide nitrile 1 and pyrimidine nitrile 2 as complementary starting points for adenain inhibition. These hits enabled the first high-resolution X-ray cocrystal structures of adenain with inhibitors bound and revealed the binding mode of 1 and 2. The screening hits were optimized by a structure-guided medicinal chemistry strategy into low nanomolar drug-like inhibitors of adenain.

PubMed: 25147618
DOI: 10.1021/ml500224t

実験手法

X-RAY DIFFRACTION (1.59 Å)