4JD8

Racemic-[Ru(phen)2(dppz)]2+] bound to synthetic DNA at high resolution

Replaces:  4E87

Summary for 4JD8

Related4DX4 4E7Y 4E87 4E8S 4E8X 4E95
DescriptorDNA (5'-D(*AP*TP*GP*CP*AP*T)-3'), Delta-Ru(phen)2(dppz) complex, Lambda-Ru(phen)2(dppz) complex, ... (5 entities in total)
Functional Keywordsintercalation, racemic ligand-dna, dna
Total number of polymer chains2
Total molecular weight5143.11
Authors
Cook, D.S.,Hall, J.P.,Cardin, C.J. (deposition date: 2013-02-24, release date: 2013-04-24, Last modification date: 2013-09-18)
Primary citation
Hall, J.P.,Cook, D.,Morte, S.R.,McIntyre, P.,Buchner, K.,Beer, H.,Cardin, D.J.,Brazier, J.A.,Winter, G.,Kelly, J.M.,Cardin, C.J.
X-ray Crystal Structure of rac-[Ru(phen)2dppz](2+) with d(ATGCAT)2 Shows Enantiomer Orientations and Water Ordering.
J.Am.Chem.Soc., 135:12652-12659, 2013
PubMed: 23875832 (PDB entries with the same primary citation)
DOI: 10.1021/ja403590e
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.16 Å)
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Structure validation

RfreeClashscoreRSRZ outliers0.16420MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 4jd8
no rotation
Molmil generated image of 4jd8
rotated about x axis by 90°
Molmil generated image of 4jd8
rotated about y axis by 90°
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