4D25

Crystal structure of the Bombyx mori Vasa helicase (E339Q) in complex with RNA and AMPPNP

4D25 の概要

• エントリーDOI: 10.2210/pdb4d25/pdb
• 関連するPDBエントリー: 4D26
• 分子名称: BMVLG PROTEIN, 5'-R(*UP*GP*AP*CP*AP*UP)-3', PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... (6 entities in total)
• 機能のキーワード: hydrolase, pirna, amplifier complex, transposon
• 由来する生物種: BOMBYX MORI (DOMESTIC SILKWORM); 詳細
• タンパク質・核酸の鎖数: 2
• 化学式量合計: 50627.84

構造登録者

Spinelli, P.,Pillai, R.S.,Kadlec, J.,Cusack, S. (登録日: 2014-05-07, 公開日: 2014-06-18, 最終更新日: 2023-12-20)

主引用文献

Xiol, J.,Spinelli, P.,Laussmann, M.A.,Homolka, D.,Yang, Z.,Cora, E.,Coute, Y.,Conn, S.,Kadlec, J.,Sachidanandam, R.,Kaksonen, M.,Cusack, S.,Ephrussi, A.,Pillai, R.S.
RNA Clamping by Vasa Assembles a Pirna Amplifier Complex on Transposon Transcripts.
Cell(Cambridge,Mass.), 157:1698-, 2014

PubMed Abstract: Germline-specific Piwi-interacting RNAs (piRNAs) protect animal genomes against transposons and are essential for fertility. piRNAs targeting active transposons are amplified by the ping-pong cycle, which couples Piwi endonucleolytic slicing of target RNAs to biogenesis of new piRNAs. Here, we describe the identification of a transient Amplifier complex that mediates biogenesis of secondary piRNAs in insect cells. Amplifier is nucleated by the DEAD box RNA helicase Vasa and contains the two Piwi proteins participating in the ping-pong loop, the Tudor protein Qin/Kumo and antisense piRNA guides. These components assemble on the surface of Vasa's helicase domain, which functions as an RNA clamp to anchor Amplifier onto transposon transcripts. We show that ATP-dependent RNP remodeling by Vasa facilitates transfer of 5' sliced piRNA precursors between ping-pong partners, and loss of this activity causes sterility in Drosophila. Our results reveal the molecular basis for the small RNA amplification that confers adaptive immunity against transposons.

PubMed: 24910301
DOI: 10.1016/J.CELL.2014.05.018

実験手法

X-RAY DIFFRACTION (1.9 Å)