4B2M

COMPLEXES OF DODECIN WITH FLAVIN AND FLAVIN-LIKE LIGANDS

Summary for 4B2M

Related2CC8 2CCB 2VX9 4B2H 4B2J 4B2K
DescriptorDODECIN, MAGNESIUM ION, SODIUM ION, ... (7 entities in total)
Functional Keywordsflavoprotein, incorporation of artificial (non-canonical) amino acids, protein reaction control
Biological sourceHALOBACTERIUM SALINARUM
Total number of polymer chains1
Total molecular weight9093.68
Authors
Staudt, H.,Hoesl, M.,Dreuw, A.,Serdjukow, S.,Oesterhelt, D.,Budisa, N.,Wachtveitl, J.,Grininger, M. (deposition date: 2012-07-16, release date: 2013-05-29, Last modification date: 2019-04-24)
Primary citation
Yu, Y.,Heidel, B.,Parapugna, T.L.,Wenderhold-Reeb, S.,Song, B.,Schonherr, H.,Grininger, M.,Noll, G.
The flavoprotein dodecin as a redox probe for electron transfer through DNA.
Angew.Chem.Int.Ed.Engl., 52:4950-4953, 2013
PubMed: 23532984 (PDB entries with the same primary citation)
DOI: 10.1002/anie.201208987
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.186500 7.9%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 4b2m
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Molmil generated image of 4b2m
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Molmil generated image of 4b2m
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More Biological unit images

Molmil generated image of 4b2m
no rotation
Molmil generated image of 4b2m
rotated about x axis by 90°
Molmil generated image of 4b2m
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (4b2m.pdb1.gz [145.52 KB])