3S9H

RB69 DNA Polymerase Triple Mutant(L561A/S565G/Y567A) ternary complex with dUpNpp and a dideoxy-terminated primer in the presence of Ca2+

Summary for 3S9H

Related3NCI 3CFO 3CFP 3CFR 3SCX 3SI6 3SJJ 3SNN
Descriptor5'-D(*TP*CP*AP*AP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3', 5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*(DOC))-3', DNA polymerase, ... (6 entities in total)
Functional Keywordsdna binding, transferase-dna complex, transferase/dna
Biological sourceEnterobacteria phage RB69
Total number of polymer chains3
Total molecular weight114715.83
Authors
Wang, M.,Wang, J.,Konigsberg, W.H. (deposition date: 2011-06-01, release date: 2011-10-12, Last modification date: 2011-11-02)
Primary citation
Xia, S.,Wang, M.,Blaha, G.,Konigsberg, W.H.,Wang, J.
Structural Insights into Complete Metal Ion Coordination from Ternary Complexes of B Family RB69 DNA Polymerase.
Biochemistry, 50:9114-9124, 2011
PubMed: 21923197 (PDB entries with the same primary citation)
DOI: 10.1021/bi201260h
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.95 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.22070.2%2.8%1.9%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 3s9h
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Molmil generated image of 3s9h
rotated about x axis by 90°
Molmil generated image of 3s9h
rotated about y axis by 90°