3PWV

An immmunodominant CTL epitope from rinderpest virus presented by cattle MHC class I molecule N*01801 (BoLA-A11)

Summary for 3PWV

DescriptorMHC class I antigen, Beta-2-microglobulin, 9-mer peptide from Hemagglutinin, ... (4 entities in total)
Functional Keywordsmhc bola-a11 conformation cattle, immunodominant epitope, immune system
Biological sourceBos taurus (bovine)
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Cellular locationSecreted P01888
Total number of polymer chains6
Total molecular weight88792.74
Authors
Li, X.,Liu, J.,Qi, J.,Gao, F.,Li, Q.,Li, X.,Zhang, N.,Xia, C.,Gao, G.F. (deposition date: 2010-12-09, release date: 2011-08-24)
Primary citation
Li, X.,Liu, J.,Qi, J.,Gao, F.,Li, Q.,Li, X.,Zhang, N.,Xia, C.,Gao, G.F.
Two distinct conformations of a rinderpest virus epitope presented by bovine major histocompatibility complex class I N*01801: a host strategy to present featured peptides
J.Virol., 85:6038-6048, 2011
PubMed: 21450819 (PDB entries with the same primary citation)
DOI: 10.1128/JVI.00030-11
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.696 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.23390.4%5.4%2.5%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 3pwv
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Molmil generated image of 3pwv
rotated about x axis by 90°
Molmil generated image of 3pwv
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 3pwv
no rotation
Molmil generated image of 3pwv
rotated about x axis by 90°
Molmil generated image of 3pwv
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (3pwv.pdb1.gz [132.61 KB])
Coordinate files for Biological unit (3pwv.pdb2.gz [133.19 KB])