3L56

Crystal structure of the large c-terminal domain of polymerase basic protein 2 from influenza virus a/viet nam/1203/2004 (h5n1)

Summary for 3L56

Related3KC6
DescriptorPolymerase PB2 (2 entities in total)
Functional Keywordsbird flu, h5n1, pb2, polymerase, host mitochondrion, mrna capping, mrna processing, structural genomics, seattle structural genomics center for infectious disease, ssgcid, viral protein
Biological sourceInfluenza A virus (A/Viet Nam/1203/2004(H5N1))
Total number of polymer chains2
Total molecular weight49539.05
Authors
Staker, B.L.,Edwards, T.,Eric, S.,Raymond, A.,Stewart, L.,Seattle Structural Genomics Center for Infectious Disease (SSGCID) (deposition date: 2009-12-21, release date: 2010-03-09, Last modification date: 2012-05-23)
Primary citation
Yamada, S.,Hatta, M.,Staker, B.L.,Watanabe, S.,Imai, M.,Shinya, K.,Sakai-Tagawa, Y.,Ito, M.,Ozawa, M.,Watanabe, T.,Sakabe, S.,Li, C.,Kim, J.H.,Myler, P.J.,Phan, I.,Raymond, A.,Smith, E.,Stacy, R.,Nidom, C.A.,Lank, S.M.,Wiseman, R.W.,Bimber, B.N.,O'Connor, D.H.,Neumann, G.,Stewart, L.J.,Kawaoka, Y.
Biological and structural characterization of a host-adapting amino acid in influenza virus.
Plos Pathog., 6:e1001034-e1001034, 2010
PubMed: 20700447 (PDB entries with the same primary citation)
DOI: 10.1371/journal.ppat.1001034
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.3 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.181502.1%1.8%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 3l56
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Molmil generated image of 3l56
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Molmil generated image of 3l56
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More Biological unit images

Molmil generated image of 3l56
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Molmil generated image of 3l56
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Molmil generated image of 3l56
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (3l56.pdb1.gz [33.15 KB])
Coordinate files for Biological unit (3l56.pdb2.gz [35.89 KB])