3IQF

Structure of F420 dependent methylene-tetrahydromethanopterin dehydrogenase in complex with methenyl-tetrahydromethanopterin

3IQF の概要

関連するPDBエントリー3IQE 3IQZ
分子名称F420-dependent methylenetetrahydromethanopterin dehydrogenase, 1-{4-[(6S,6aR,7R)-3-amino-6,7-dimethyl-1-oxo-1,2,5,6,6a,7-hexahydro-8H-imidazo[1,5-f]pteridin-10-ium-8-yl]phenyl}-1-deoxy-5-O-{5-O-[(S)-{[(1S)-1,3-dicarboxypropyl]oxy}(hydroxy)phosphoryl]-alpha-D-ribofuranosyl}-D-ribitol, CALCIUM ION, ... (5 entities in total)
機能のキーワードbinary complex of protein and substrate, methanogenesis, one-carbon metabolism, oxidoreductase
由来する生物種Methanopyrus kandleri
ポリマー鎖数12
分子量合計386746.38
構造登録者
Ceh, K.E.,Demmer, U.,Warkentin, E.,Moll, J.,Thauer, R.K.,Shima, S.,Ermler, U. (登録日: 2009-08-20, 公開日: 2009-10-06, 最終更新日: 2011-07-13)
主引用文献
Ceh, K.,Demmer, U.,Warkentin, E.,Moll, J.,Thauer, R.K.,Shima, S.,Ermler, U.
Structural basis of the hydride transfer mechanism in F(420)-dependent methylenetetrahydromethanopterin dehydrogenase
Biochemistry, 48:10098-10105, 2009
PubMed: 19761261 (主引用文献が同じPDBエントリー)
DOI: 10.1021/bi901104d
MImport into Mendeley
実験手法
X-RAY DIFFRACTION (2.1 Å)
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構造検証レポート

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.20850.2%3.3%3.1%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
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