3IC1

Crystal structure of zinc-bound succinyl-diaminopimelate desuccinylase from Haemophilus influenzae

Summary for 3IC1

DescriptorSuccinyl-diaminopimelate desuccinylase, ZINC ION, GLYCEROL, ... (5 entities in total)
Functional Keywordsdape, psi2, mcsg, zn bound, succinyl-diaminopimelate desuccinylase, structural genomics, protein structure initiative, midwest center for structural genomics, amino-acid biosynthesis, cobalt, diaminopimelate biosynthesis, hydrolase, lysine biosynthesis, metal-binding
Biological sourceHaemophilus influenzae
Total number of polymer chains2
Total molecular weight83722.05
Authors
Nocek, B.P.,Gillner, D.M.,Holz, R.C.,Joachimiak, A.,Midwest Center for Structural Genomics (MCSG) (deposition date: 2009-07-17, release date: 2009-09-22, Last modification date: 2011-07-13)
Primary citation
Nocek, B.P.,Gillner, D.M.,Fan, Y.,Holz, R.C.,Joachimiak, A.
Structural basis for catalysis by the mono- and dimetalated forms of the dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase.
J.Mol.Biol., 397:617-626, 2010
PubMed: 20138056 (PDB entries with the same primary citation)
DOI: 10.1016/j.jmb.2010.01.062
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.3 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.202501.9%2.2%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
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