3GIJ

Dpo4 extension ternary complex with oxoG(syn)-A(anti) and oxoG(anti)-A(syn) pairs

Summary for 3GIJ

• Entry DOI: 10.2210/pdb3gij/pdb
• Related: 2ASD 2ASJ 2ASL 3GII 3GIK 3GIL 3GIM
• Descriptor: DNA polymerase IV, 5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(2DA))-3', 5'-D(*CP*TP*AP*AP*CP*(8OG)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*C)-3', ... (6 entities in total)
• Functional Keywords: dna polymerase, 8-oxoguanine, y-family, lesion bypass, dna damage, dna repair, dna replication, dna-binding, dna-directed dna polymerase, magnesium, metal-binding, mutator protein, nucleotidyltransferase, transferase, transferase-dna complex, transferase/dna
• Biological source: Sulfolobus solfataricus P2; More
• Cellular location: Cytoplasm (Probable): Q97W02
• Total number of polymer chains: 6
• Total formula weight: 98097.97

Authors

Rechkoblit, O.,Malinina, L.,Patel, D.J. (deposition date: 2009-03-05, release date: 2009-05-19, Last modification date: 2023-09-06)

• Primary citation: Rechkoblit, O.,Malinina, L.,Cheng, Y.,Geacintov, N.E.,Broyde, S.,Patel, D.J.; Impact of conformational heterogeneity of OxoG lesions and their pairing partners on bypass fidelity by Y family polymerases.; Structure, 17:725-736, 2009; PubMed: 19446528; DOI: 10.1016/j.str.2009.03.011

Experimental method

X-RAY DIFFRACTION (2.4 Å)