3FY0

Crystal structure of PAK1 kinase domain with ruthenium complex DW1

3FY0 の概要

• エントリーDOI: 10.2210/pdb3fy0/pdb
• 関連するPDBエントリー: 3FXZ
• 分子名称: Serine/threonine-protein kinase PAK 1, Ruthenium pyridocarbazole (3 entities in total)
• 機能のキーワード: transferase, kinase, atp-binding, phosphorylation, allosteric enzyme, apoptosis, cell junction, nucleotide-binding, phosphoprotein, serine/threonine-protein kinase
• 由来する生物種: Homo sapiens (human)
• 細胞内の位置: Cytoplasm : Q13153
• タンパク質・核酸の鎖数: 1
• 化学式量合計: 33863.68

構造登録者

Maksimoska, J.,Marmorstein, R.,Meggers, E. (登録日: 2009-01-21, 公開日: 2009-03-03, 最終更新日: 2024-11-06)

主引用文献

Maksimoska, J.,Feng, L.,Harms, K.,Yi, C.,Kissil, J.,Marmorstein, R.,Meggers, E.
Targeting Large Kinase Active Site with Rigid, Bulky Octahedral Ruthenium Complexes
J.Am.Chem.Soc., 130:15764-15765, 2008

PubMed Abstract: A strategy for targeting protein kinases with large ATP-binding sites by using bulky and rigid octahedral ruthenium complexes as structural scaffolds is presented. A highly potent and selective GSK3 and Pim1 half-sandwich complex NP309 was successfully converted into a PAK1 inhibitor by making use of the large octahedral compounds Lambda-FL172 and Lambda-FL411 in which the cyclopentadienyl moiety of NP309 is replaced by a chloride and sterically demanding diimine ligands. A 1.65 A cocrystal structure of PAK1 with Lambda-FL172 reveals how the large coordination sphere of the ruthenium complex matches the size of the active site and serves as a yardstick to discriminate between otherwise closely related binding sites.

PubMed: 18973295

実験手法

X-RAY DIFFRACTION (2.35 Å)