3F59

Crystal structure of ZU5-ANK, the spectrin binding region of human erythroid ankyrin

3F59 の概要

• エントリーDOI: 10.2210/pdb3f59/pdb
• 関連するPDBエントリー: 3F57
• 分子名称: Ankyrin-1, BROMIDE ION (3 entities in total)
• 機能のキーワード: beta sandwich, zu5, ankyrin, spectrin binding, alternative promoter usage, ank repeat, cytoskeleton, disease mutation, elliptocytosis, hereditary hemolytic anemia, lipoprotein, membrane, phosphoprotein, sarcoplasmic reticulum, structural protein
• 由来する生物種: Homo sapiens
• 細胞内の位置: Isoform Er1: Cytoplasm, cytoskeleton. Isoform Mu17: Membrane. Isoform Mu18: Sarcoplasmic reticulum . Isoform Mu19: Sarcoplasmic reticulum . Isoform Mu20: Sarcoplasmic reticulum : P16157
• タンパク質・核酸の鎖数: 4
• 化学式量合計: 72980.65

構造登録者

Ipsaro, J.J.,Huang, L.,Mondragon, A. (登録日: 2008-11-03, 公開日: 2009-02-24, 最終更新日: 2023-12-27)

主引用文献

Ipsaro, J.J.,Huang, L.,Mondragon, A.
Structures of the spectrin-ankyrin interaction binding domains.
Blood, 113:5385-5393, 2009

PubMed Abstract: As key components of the erythrocyte membrane skeleton, spectrin and ankyrin specifically interact to tether the spectrin cytoskeleton to the cell membrane. The structure of the spectrin binding domain of ankyrin and the ankyrin binding domain of spectrin have been solved to elucidate the structural basis for ankyrin-spectrin recognition. The structure of repeats 14 and 15 of spectrin shows that these repeats are similar to all other spectrin repeats. One feature that could account for the preference of ankyrin for these repeats is the presence of a conserved, negatively charged patch on one side of repeat 14. The structure of the ankyrin ZU5 domain shows a novel structure containing a beta core. The structure reveals that the canonical ZU5 consensus sequence is likely to be missing an important region that codes for a beta strand that forms part of the core of the domain. In addition, a positively charged region is suggestive of a binding surface for the negatively charged spectrin repeat 14. Previously reported mutants of ankyrin that map to this region lie mostly on the surface of the protein, although at least one is likely to be part of the core.

PubMed: 19141864
DOI: 10.1182/blood-2008-10-184358

実験手法

X-RAY DIFFRACTION (2 Å)