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3DPR

Human rhinovirus 2 bound to a concatamer of the VLDL receptor module V3

Summary for 3DPR
Entry DOI10.2210/pdb3dpr/pdb
DescriptorProtein VP1, Protein VP2, Protein VP3, ... (7 entities in total)
Functional Keywordshuman rhinovirus, vldl-receptor, virus-protein complex, icosahedral virus, atp-binding, capsid protein, covalent protein-rna linkage, cytoplasmic vesicle, helicase, host-virus interaction, hydrolase, lipoprotein, membrane, myristate, nucleotide-binding, nucleotidyltransferase, phosphoprotein, protease, rna replication, rna-binding, rna-directed rna polymerase, thiol protease, transferase, virion, cholesterol metabolism, coated pit, egf-like domain, endocytosis, glycoprotein, lipid metabolism, lipid transport, receptor, steroid metabolism, transmembrane, transport, vldl, virus
Biological sourceHomo sapiens (Human)
More
Cellular locationCapsid protein VP0: Virion . Capsid protein VP4: Virion . Capsid protein VP2: Virion . Capsid protein VP3: Virion . Capsid protein VP1: Virion . Protein 2B: Host cytoplasmic vesicle membrane ; Peripheral membrane protein ; Cytoplasmic side . Protein 2C: Host cytoplasmic vesicle membrane ; Peripheral membrane protein ; Cytoplasmic side . Protein 3A: Host cytoplasmic vesicle membrane ; Peripheral membrane protein ; Cytoplasmic side . Protein 3AB: Host cytoplasmic vesicle membrane ; Peripheral membrane protein ; Cytoplasmic side . Viral protein genome-linked: Virion . Protease 3C: Host cytoplasm . Protein 3CD: Host cytoplasmic vesicle membrane ; Peripheral membrane protein ; Cytoplasmic side . RNA-directed RNA polymerase: Host cytoplasmic vesicle membrane ; Peripheral membrane protein ; Cytoplasmic side : P04936 P04936 P04936 P04936
Membrane; Single-pass type I membrane protein: P98155
Total number of polymer chains5
Total formula weight99914.08
Authors
Querol-Audi, J.,Pous, J.,Fita, I.,Verdaguer, N. (deposition date: 2008-07-09, release date: 2009-04-07, Last modification date: 2017-10-25)
Primary citationQuerol-Audi, J.,Konecsni, T.,Pous, J.,Carugo, O.,Fita, I.,Verdaguer, N.,Blaas, D.
Minor group human rhinovirus-receptor interactions: geometry of multimodular attachment and basis of recognition
Febs Lett., 583:235-240, 2009
Cited by
PubMed: 19073182
DOI: 10.1016/j.febslet.2008.12.014
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (3.5 Å)
Structure validation

217705

數據於2024-03-27公開中

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