30GH

CryoEM structure of human MATa2 in complex with MAT2B isoform v1 at 2.6 A resolution

Summary for 30GH

• Entry DOI: 10.2210/pdb30gh/pdb
• EMDB information: 57756
• Descriptor: S-adenosylmethionine synthase isoform type-2, Isoform 1 of Methionine adenosyltransferase 2 subunit beta (2 entities in total)
• Functional Keywords: methylation, adomet, same, protein-protein complexes, transferase
• Biological source: Homo sapiens (human); More
• Total number of polymer chains: 6
• Total formula weight: 250090.06

Authors

Khaja, F.,Antonyuk, S.V.,Muench, S.P.,Hasnain, S.S. (deposition date: 2026-04-23, release date: 2026-05-13, Last modification date: 2026-07-08)

Primary citation

Khaja, F.T.,Vara, R.,Aspinall, L.P.,Merriman, C.,Maerivoet, A.,White, J.B.R.,Muench, S.P.,Hasnain, S.S.,Antonyuk, S.V.
CryoEM structures reveal allosteric regulation of the catalytic activity of the multi-protein human MAT enzyme complexes.
Iucrj, 2026

PubMed Abstract: S-Adenosyl methionine (SAMe), the biological methyl donor essential for sustaining the life of most complex organisms, is the second most widely used cofactor, after ATP, in biochemical reactions and is synthesized by the enzyme methionine adenosyl transferase (MAT) from ATP and methionine. MAT, also known as S-adenosylmethionine synthetase, is found in almost every organism. SAMe is employed universally by different methyltransferases that catalyze the methylation of biomolecules such as nucleic acids, proteins and lipids. In plant cells SAMe produced by MAT enzymes controls the level of critical metabolites such as ethylene, polyamines and biotin, and regulates essential cellular processes such as cell division and synthesis of cell wall, chlorophyll and membrane. MAT enzyme complex MATα2β, comprising the catalytic unit MATα2 and the regulatory protein MATβ, is found in nearly all human tissues and is essential for providing the necessary SAMe flux for methylation of DNA and various proteins including histones. The enzymatic activity of MATα2 is enhanced by several fold upon complexation with both variants of MATβ (βV1 and βV2). Using cryogenic electron microscopy, we determined the high-resolution resting-state structures of the MATα2βV1 and MATα2βV2 complexes, providing insights into the allosteric regulation of MAT catalytic activity, revealing how MATβV association could facilitate substrate binding, stabilize the transition state and promote product release to drive the catalytic cycle, and opening new possibilities for inhibitor binding.

PubMed: 42329745
DOI: 10.1107/S2052252526005075

Experimental method

ELECTRON MICROSCOPY (3.1 Å)