2ZXQ

Crystal structure of endo-alpha-N-acetylgalactosaminidase from Bifidobacterium longum (EngBF)

Summary for 2ZXQ

DescriptorEndo-alpha-N-acetylgalactosaminidase, MANGANESE (II) ION, (4S)-2-METHYL-2,4-PENTANEDIOL, ... (4 entities in total)
Functional Keywordsbroken tim barrel, glycosidase, hydrolase
Biological sourceBifidobacterium longum
Total number of polymer chains1
Total molecular weight150369.07
Authors
Suzuki, R.,Katayama, T.,Ashida, H.,Yamamoto, K.,Kitaoka, M.,Fushinobu, S. (deposition date: 2009-01-05, release date: 2009-06-16, Last modification date: 2011-07-13)
Primary citation
Suzuki, R.,Katayama, T.,Kitaoka, M.,Kumagai, H.,Wakagi, T.,Shoun, H.,Ashida, H.,Yamamoto, K.,Fushinobu, S.
Crystallographic and mutational analyses of substrate recognition of endo-{alpha}-N-acetylgalactosaminidase from Bifidobacterium longum.
J.Biochem., 2009
PubMed: 19502354 (PDB entries with the same primary citation)
DOI: 10.1093/jb/mvp086
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.19730.3%2.4%1.4%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 2zxq
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Molmil generated image of 2zxq
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Molmil generated image of 2zxq
rotated about y axis by 90°