2XD0

A processed non-coding RNA regulates a bacterial antiviral system

Summary for 2XD0

Related2XDB 2XDD
DescriptorTOXN, TOXI (3 entities in total)
Functional Keywordstoxin-rna complex, abortive infection, phage, toxin/rna
Biological sourcePECTOBACTERIUM ATROSEPTICUM
Total number of polymer chains12
Total molecular weight187813.96
Authors
Blower, T.R.,Pei, X.Y.,Short, F.L.,Fineran, P.C.,Humphreys, D.P.,Luisi, B.F.,Salmond, G.P.C. (deposition date: 2010-04-28, release date: 2011-01-12, Last modification date: 2019-01-30)
Primary citation
Blower, T.R.,Pei, X.Y.,Short, F.L.,Fineran, P.C.,Humphreys, D.P.,Luisi, B.F.,Salmond, G.P.
A processed noncoding RNA regulates an altruistic bacterial antiviral system.
Nat. Struct. Mol. Biol., 18:185-190, 2011
PubMed: 21240270 (PDB entries with the same primary citation)
DOI: 10.1038/nsmb.1981
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (3 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliersRNA backbone 0.21317 1.9% 8.7% 2.5% 0.38MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 2xd0
no rotation
Molmil generated image of 2xd0
rotated about x axis by 90°
Molmil generated image of 2xd0
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 2xd0
no rotation
Molmil generated image of 2xd0
rotated about x axis by 90°
Molmil generated image of 2xd0
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (2xd0.pdb6.gz [93.24 KB])
Coordinate files for Biological unit (2xd0.pdb5.gz [94.44 KB])
Coordinate files for Biological unit (2xd0.pdb3.gz [91.02 KB])
Coordinate files for Biological unit (2xd0.pdb1.gz [91.96 KB])
Coordinate files for Biological unit (2xd0.pdb4.gz [91.94 KB])
Coordinate files for Biological unit (2xd0.pdb2.gz [91 KB])
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