50S subunit with EF-G(GDPNP) and RRF bound

Summary for 2RDO

Related2BM0 2AW4 1EK8 1MZP
EMDB information1430
Descriptor5S RIBOSOMAL RNA, 23S RIBOSOMAL RNA, 50S ribosomal protein L25, ... (34 entities in total)
Functional Keywordselongation factor g, ef-g, rrf, ribosome recycling factor, gdpnp, 50s subunit, cryo-em, real-space refinement, ribonucleoprotein, ribosomal protein, rna-binding, rrna-binding, methylation, antibiotic resistance, repressor, transcription, transcription regulation, transcription termination, translation regulation, trna-binding, phosphoprotein, metal-binding, gtp-binding, nucleotide-binding, protein biosynthesis, ribosome
Biological sourceEscherichia coli
Total number of polymer chains34
Total molecular weight1477824.49
Gao, N.,Zavialov, A.V.,Ehrenberg, M.,Frank, J. (deposition date: 2007-09-24, release date: 2008-03-04, Last modification date: 2018-07-18)
Primary citation
Gao, N.,Zavialov, A.V.,Ehrenberg, M.,Frank, J.
Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits.
J.Mol.Biol., 374:1345-1358, 2007
PubMed: 17996252 (PDB entries with the same primary citation)
DOI: 10.1016/j.jmb.2007.10.021
MImport into Mendeley
Experimental method
NMR Information

Structure validation

ClashscoreRNA backbone10.00MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all EM structures