Solution Structure of Mutant of BMAP-28(1-18)

> Summary

Summary for 2NDE

DescriptorCathelicidin-5 (1 entity in total)
Functional Keywordsamp, antimicrobial protein
Biological sourceBos taurus (bovine)
Cellular locationSecreted P54229
Total number of polymer chains1
Total molecular weight1999.49
Agadi, N.,Kumar, A. (deposition date: 2016-05-12, release date: 2017-09-13)
Primary citation
Agadi, N.,Kumar, A.
Structure, Function And Membrane Interaction Studies of Two Synthetic Peptides Using Solution And Solid State NMR
To be Published,
Experimental method

Structure validation

ClashscoreRamachandran outliersSidechain outliers62.3%3.0%MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all NMR structures

More Asymmetric unit images

Molmil generated image of 2nde
no rotation
Molmil generated image of 2nde
rotated about x axis by 90°
Molmil generated image of 2nde
rotated about y axis by 90°

> Structural details


Chain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
UniProt (P54229)
Bos taurusAntibacterial peptide BMAP-28, Myeloid antibacterial peptide 28

Sequence viewer

Contents of the asymmetric unit

PolymersNumber of chains1
Total molecular weight1999.5
Non-Polymers*Number of molecules0
Total molecular weight0.0
All*Total molecular weight1999.5
*Water molecules are not included.

> Experimental details


Experimental method:SOLUTION NMR

Spectrometer IDSpectrometer makerSpectrometer modelSpectrometer typeSpectrometer field strength
1BrukerASCENDBruker ASCEND750
2BrukerAvanceBruker Avance700


experiment idconditions idsolution idExperiment type
1112D 1H-1H TOCSY
2112D 1H-15N HSQC
3112D 1H-13C HSQC
4112D 1H-1H NOESY

NMR Sample

conditions idNMR sample pHNMR sample pressureNMR sample temperature


Conformers Calculated Total Number200
Conformers Submitted Total Number10

> Functional details


Functional Information from GO Data


Functional Information from PDB Data

site_idNumber of ResiduesDetails

Functional Information from PDB atom coordinates for the "HETATM" binding sites

site_idNumber of ResiduesDetails

Functional Information from PROSITE/UniProt

site_idNumber of ResiduesDetails

Functional Information from SwissProt/UniProt

site_idNumber of ResiduesDetails

Catalytic Information from CSA

site_idNumber of ResiduesDetails

> Sequence Neighbor

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