2JSE

NMR reveals absence of hydrogen bonding in adjacent UU and AG mismatches in an isolated internal loop from ribosomal RNA.

Summary for 2JSE

• Entry DOI: 10.2210/pdb2jse/pdb
• Descriptor: RNA (5'-R(*GP*GP*AP*GP*UP*GP*GP*CP*CP*GP*AP*AP*AP*GP*GP*CP*AP*UP*CP*UP*CP*C)-3') (1 entity in total)
• Functional Keywords: nmr structure of rna loop 5' gugg 3' / 3' cuac 5', g base flipped out, 2x2 thermodynamics, lack of hydrogen bonding, absence of hydrogen bonding, uu internal loop, uu/ag internal loop, ag internal loop, internal loop from protein l11 binding site, rna
• Total number of polymer chains: 1
• Total formula weight: 7112.31

Authors

Shankar, N. (deposition date: 2007-07-03, release date: 2007-11-20, Last modification date: 2022-03-16)

• Primary citation: Shankar, N.,Xia, T.,Kennedy, S.D.,Krugh, T.R.,Mathews, D.H.,Turner, D.H.; NMR Reveals the Absence of Hydrogen Bonding in Adjacent UU and AG Mismatches in an Isolated Internal Loop from Ribosomal RNA; Biochemistry, 46:12665-12678, 2007; PubMed: 17929882; DOI: 10.1021/bi700802s

Experimental method

SOLUTION NMR