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2IBF

Human vinculin's head domain (Vh1, residues 1-258) in complex with two vinculin binding sites of Shigella flexneri's IpaA (residues 565-587)

2IBF の概要
エントリーDOI10.2210/pdb2ibf/pdb
関連するPDBエントリー1RKC 1RKE 1SYQ 1YDI 2GWW 2HSQ
分子名称Vinculin, Invasin ipaA (2 entities in total)
機能のキーワードcell adhesion, structural protein
由来する生物種Homo sapiens (human)
詳細
細胞内の位置Cytoplasm, cytoskeleton: P18206
Secreted: P18010
タンパク質・核酸の鎖数3
化学式量合計35530.80
構造登録者
Izard, T. (登録日: 2006-09-11, 公開日: 2007-09-18, 最終更新日: 2024-02-21)
主引用文献Nhieu, G.T.,Izard, T.
Vinculin binding in its closed conformation by a helix addition mechanism.
Embo J., 26:4588-4596, 2007
Cited by
PubMed Abstract: Vinculin links integrin receptors to the actin cytoskeleton by binding to talin. Vinculin is held in an inactive, closed-clamp conformation through hydrophobic interactions between its head and tail domains, and vinculin activation has long been thought to be dependent upon severing the head-tail interaction. Talin, alpha-actinin, and the invasin IpaA of Shigella flexneri sever vinculin's head-tail interaction by inserting an alpha-helix into vinculin's N-terminal four-helical bundle, provoking extensive conformational changes by a helical bundle conversion mechanism; these alterations in vinculin structure displace its tail domain, allowing vinculin to bind to its other partners. IpaA harbors two juxtaposed alpha-helical vinculin-binding sites (VBS) in its C-terminus. Here, we report that the lower affinity VBS of IpaA can also bind to the adjacent C-terminal four-helical bundle of vinculin's head domain through a helix addition mechanism. These hydrophobic interactions do not alter the conformation of this helical bundle, and the architecture of the complex suggests that IpaA can simultaneously interact with both of the four-helical bundle domains of vinculin's N-terminus to stabilize vinculin-IpaA interactions.
PubMed: 17932491
DOI: 10.1038/sj.emboj.7601863
主引用文献が同じPDBエントリー
実験手法
X-RAY DIFFRACTION (3.2 Å)
構造検証レポート
Validation report summary of 2ibf
検証レポート(詳細版)ダウンロードをダウンロード

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件を2026-04-08に公開中

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