2GUB

Crystal Structure of Metal Free D-Xylose Isomerase.

Summary for 2GUB

Related1XIB 2GLK
DescriptorXylose isomerase (2 entities in total)
Functional Keywordstim barrel, beta-alpha-barrel, metal-free, inactive enzyme, sugar interconversion, isomerase
Biological sourceStreptomyces rubiginosus
Cellular locationCytoplasm P24300
Total number of polymer chains1
Total molecular weight43283.3
Authors
Carrell, H.L.,Katz, A.K.,Glusker, J.P. (deposition date: 2006-04-29, release date: 2006-05-16, Last modification date: 2011-07-13)
Primary citation
Katz, A.K.,Li, X.,Carrell, H.L.,Hanson, B.L.,Langan, P.,Coates, L.,Schoenborn, B.P.,Glusker, J.P.,Bunick, G.J.
Locating active-site hydrogen atoms in D-xylose isomerase: Time-of-flight neutron diffraction.
Proc.Natl.Acad.Sci.Usa, 103:8342-8347, 2006
PubMed: 16707576 (PDB entries with the same primary citation)
DOI: 10.1073/pnas.0602598103
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.8 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.18140.3%2.6%1.3%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 2gub
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Molmil generated image of 2gub
rotated about x axis by 90°
Molmil generated image of 2gub
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 2gub
no rotation
Molmil generated image of 2gub
rotated about x axis by 90°
Molmil generated image of 2gub
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (2gub.pdb1.gz [270.46 KB])