Crystal structure of the glycogen phosphorylase B / methyl-N-(beta-D-glucopyranosyl)oxamate complex

Summary for 2F3Q

Related2F3P 2F3S 2F3U
DescriptorGlycogen phosphorylase, muscle form, PYRIDOXAL-5'-PHOSPHATE, N-[methoxy(oxo)acetyl]-beta-D-glucopyranosylamine, ... (4 entities in total)
Functional Keywordsglycogenolysis, type 2 diabetes, transferase
Biological sourceOryctolagus cuniculus (rabbit)
Total number of polymer chains1
Total molecular weight97803.56
Oikonomakos, N.G.,Leonidas, D.D. (deposition date: 2005-11-22, release date: 2006-05-09, Last modification date: 2020-07-29)
Primary citation
Hadjiloi, T.,Tiraidis, C.,Chrysina, E.D.,Leonidas, D.D.,Oikonomakos, N.G.,Tsipos, P.,Gimisis, T.
Binding of oxalyl derivatives of beta-d-glucopyranosylamine to muscle glycogen phosphorylase b.
Bioorg.Med.Chem., 14:3872-3882, 2006
PubMed: 16464598 (PDB entries with the same primary citation)
DOI: 10.1016/j.bmc.2006.01.045
MImport into Mendeley
Experimental method

Structure validation

ClashscoreRamachandran outliersSidechain outliers6 0.1% 3.9%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
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PDB entries from 2020-10-21