2DXS

Crystal structure of HCV NS5B RNA polymerase complexed with a tetracyclic inhibitor

2DXS の概要

• エントリーDOI: 10.2210/pdb2dxs/pdb
• 関連するPDBエントリー: 1QUV
• 分子名称: Genome polyprotein, N-[(13-CYCLOHEXYL-6,7-DIHYDROINDOLO[1,2-D][1,4]BENZOXAZEPIN-10-YL)CARBONYL]-2-METHYL-L-ALANINE (3 entities in total)
• 機能のキーワード: hcv, ns5b, rna polymerase, transferase-transferase inhibitor complex, transferase/transferase inhibitor
• 由来する生物種: Hepatitis C virus
• 細胞内の位置: Core protein p21: Host endoplasmic reticulum membrane; Single-pass membrane protein. Core protein p19: Virion (By similarity). Envelope glycoprotein E1: Virion membrane; Single-pass type I membrane protein (Potential). Envelope glycoprotein E2: Virion membrane; Single-pass type I membrane protein (Potential). p7: Host endoplasmic reticulum membrane; Multi-pass membrane protein (By similarity). Protease NS2-3: Host endoplasmic reticulum membrane; Multi-pass membrane protein (Potential). Serine protease NS3: Host endoplasmic reticulum membrane; Peripheral membrane protein (By similarity). Non-structural protein 4A: Host endoplasmic reticulum membrane; Single-pass type I membrane protein (Potential). Non-structural protein 4B: Host endoplasmic reticulum membrane; Multi-pass membrane protein (By similarity). Non-structural protein 5A: Host endoplasmic reticulum membrane; Peripheral membrane protein (By similarity). RNA-directed RNA polymerase: Host endoplasmic reticulum membrane; Single-pass type I membrane protein (Potential): P26663
• タンパク質・核酸の鎖数: 2
• 化学式量合計: 123607.73

構造登録者

Adachi, T.,Tsuruha, J.,Doi, S.,Murase, K.,Ikegashira, K.,Watanabe, S.,Uehara, K.,Orita, T.,Nomura, A.,Kamada, M. (登録日: 2006-08-30, 公開日: 2006-12-26, 最終更新日: 2023-10-25)

• 主引用文献: Ikegashira, K.,Oka, T.,Hirashima, S.,Noji, S.,Yamanaka, H.,Hara, Y.,Adachi, T.,Tsuruha, J.,Doi, S.,Hase, Y.,Noguchi, T.,Ando, I.,Ogura, N.,Ikeda, S.,Hashimoto, H.; Discovery of Conformationally Constrained Tetracyclic Compounds as Potent Hepatitis C Virus NS5B RNA Polymerase Inhibitors; J.Med.Chem., 49:6950-6953, 2006; PubMed: 17125247; DOI: 10.1021/jm0610245

実験手法

X-RAY DIFFRACTION (2.2 Å)