Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1SGV

STRUCTURE OF TRNA PSI55 PSEUDOURIDINE SYNTHASE (TRUB)

Replaces:  1S71
Summary for 1SGV
Entry DOI10.2210/pdb1sgv/pdb
DescriptortRNA pseudouridine synthase B (2 entities in total)
Functional Keywordshinged motion, trna modification, structural genomics, psi, protein structure initiative, tb structural genomics consortium, tbsgc, lyase
Biological sourceMycobacterium tuberculosis
Total number of polymer chains2
Total formula weight67721.72
Authors
Chaudhuri, B.N.,Chan, S.,Perry, L.J.,Yeates, T.O.,TB Structural Genomics Consortium (TBSGC) (deposition date: 2004-02-24, release date: 2004-03-02, Last modification date: 2023-08-23)
Primary citationChaudhuri, B.N.,Chan, S.,Perry, L.J.,Yeates, T.O.
Crystal structure of the apo forms of psi 55 tRNA pseudouridine synthase from Mycobacterium tuberculosis: a hinge at the base of the catalytic cleft.
J.Biol.Chem., 279:24585-24591, 2004
Cited by
PubMed Abstract: The three-dimensional structure of the RNA-modifying enzyme, psi55 tRNA pseudouridine synthase from Mycobacterium tuberculosis, is reported. The 1.9-A resolution crystal structure reveals the enzyme, free of substrate, in two distinct conformations. The structure depicts an interesting mode of protein flexibility involving a hinged bending in the central beta-sheet of the catalytic module. Key parts of the active site cleft are also found to be disordered in the substrate-free form of the enzyme. The hinge bending appears to act as a clamp to position the substrate. Our structural data furthers the previously proposed mechanism of tRNA recognition. The present crystal structure emphasizes the significant role that protein dynamics must play in tRNA recognition, base flipping, and modification.
PubMed: 15028724
DOI: 10.1074/jbc.M401045200
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (1.9 Å)
Structure validation

227561

PDB entries from 2024-11-20

PDB statisticsPDBj update infoContact PDBjnumon