1S4I

Crystal structure of a SOD-like protein from Bacillus subtilis

Summary for 1S4I

Descriptorsuperoxide dismutase-like protein yojM, ZINC ION, CHLORIDE ION, ... (4 entities in total)
Functional Keywordssod, cu-zn sod, sod-like, superoxide dismutase, oxidoreductase
Biological sourceBacillus subtilis
Cellular locationCell membrane; Lipid-anchor (Potential) O31851
Total number of polymer chains4
Total molecular weight75489.43
Authors
Banci, L.,Bertini, I.,Calderone, V.,Cramaro, F.,Del Conte, R.,Fantoni, A.,Mangani, S.,Quattrone, A.,Viezzoli, M.S. (deposition date: 2004-01-16, release date: 2005-04-26, Last modification date: 2011-07-13)
Primary citation
Banci, L.,Bertini, I.,Calderone, V.,Cramaro, F.,Del Conte, R.,Fantoni, A.,Mangani, S.,Quattrone, A.,Viezzoli, M.S.
A prokaryotic superoxide dismutase paralog lacking two Cu ligands: from largely unstructured in solution to ordered in the crystal.
Proc.Natl.Acad.Sci.Usa, 102:7541-7546, 2005
PubMed: 15897454 (PDB entries with the same primary citation)
DOI: 10.1073/pnas.0502450102
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.8 Å)
NMR Information
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.275293.5%14.4%3.6%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 1s4i
no rotation
Molmil generated image of 1s4i
rotated about x axis by 90°
Molmil generated image of 1s4i
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 1s4i
no rotation
Molmil generated image of 1s4i
rotated about x axis by 90°
Molmil generated image of 1s4i
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (1s4i.pdb4.gz [27.67 KB])
Coordinate files for Biological unit (1s4i.pdb5.gz [52.3 KB])
Coordinate files for Biological unit (1s4i.pdb2.gz [27.55 KB])
Coordinate files for Biological unit (1s4i.pdb6.gz [51.27 KB])
Coordinate files for Biological unit (1s4i.pdb1.gz [27.91 KB])
Coordinate files for Biological unit (1s4i.pdb3.gz [26.97 KB])