1QY9

Crystal structure of E. coli Se-MET protein YDDE

Summary for 1QY9

Related1QYA
DescriptorHYPOTHETICAL PROTEIN yddE, GLYCEROL, HYDROXIDE ION, ... (4 entities in total)
Functional Keywordsputative phenazine biosynthesis protein; epimerase; antibiotic biosynthesis protein; structural genomics, unknown function
Biological sourceEscherichia coli
Total number of polymer chains4
Total molecular weight130849.74
Authors
Grassick, A.,Sulzenbacher, G.,Roig-Zamboni, V.,Campanacci, V.,Cambillau, C.,Bourne, Y. (deposition date: 2003-09-10, release date: 2004-06-08, Last modification date: 2011-07-13)
Primary citation
Grassick, A.,Sulzenbacher, G.,Roig-Zamboni, V.,Campanacci, V.,Cambillau, C.,Bourne, Y.
Crystal structure of E. coli yddE protein reveals a striking homology with diaminopimelate epimerase
Proteins, 55:764-767, 2004
PubMed: 15103639 (PDB entries with the same primary citation)
DOI: 10.1002/prot.20025
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.05 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.21420.1%1.8%4.0%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 1qy9
no rotation
Molmil generated image of 1qy9
rotated about x axis by 90°
Molmil generated image of 1qy9
rotated about y axis by 90°