1PDA

STRUCTURE OF PORPHOBILINOGEN DEAMINASE REVEALS A FLEXIBLE MULTIDOMAIN POLYMERASE WITH A SINGLE CATALYTIC SITE

Summary for 1PDA

DescriptorPORPHOBILINOGEN DEAMINASE, 3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid, ACETIC ACID, ... (4 entities in total)
Functional Keywordsporphyrin, transferase
Biological sourceEscherichia coli
Total number of polymer chains1
Total molecular weight34372.27
Authors
Louie, G.V.,Brownlie, P.D.,Lambert, R.,Cooper, J.B.,Blundell, T.L.,Wood, S.P.,Warren, M.J.,Woodcock, S.C.,Jordan, P.M. (deposition date: 1992-11-17, release date: 1993-10-31, Last modification date: 2019-07-17)
Primary citation
Louie, G.V.,Brownlie, P.D.,Lambert, R.,Cooper, J.B.,Blundell, T.L.,Wood, S.P.,Warren, M.J.,Woodcock, S.C.,Jordan, P.M.
Structure of porphobilinogen deaminase reveals a flexible multidomain polymerase with a single catalytic site.
Nature, 359:33-39, 1992
PubMed: 1522882 (PDB entries with the same primary citation)
DOI: 10.1038/359033a0
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.76 Å)
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Structure validation

ClashscoreRamachandran outliersSidechain outliersRSRZ outliers6 0.3% 3.0% 3.7%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution