1DB5

HUMAN S-PLA2 IN COMPLEX WITH INDOLE 6

1DB5 の概要

• エントリーDOI: 10.2210/pdb1db5/pdb
• 関連するPDBエントリー: 1DB4 1DCY
• 分子名称: PROTEIN (PHOSPHOLIPASE A2), CALCIUM ION, 4-(1-BENZYL-3-CARBAMOYLMETHYL-2-METHYL-1H-INDOL-5-YLOXY)-BUTYRIC ACID, ... (4 entities in total)
• 機能のキーワード: s-pla2; structure-based drug design, hydrolase/hydrolase inhibitor, hydrolase-hydrolase inhibitor complex
• 由来する生物種: Homo sapiens (human)
• 細胞内の位置: Membrane; Peripheral membrane protein: P14555
• タンパク質・核酸の鎖数: 1
• 化学式量合計: 14405.61

構造登録者

Chirgadze, N.Y.,Schevitz, R.W.,Wery, J.-P. (登録日: 1999-11-02, 公開日: 1999-11-12, 最終更新日: 2024-10-30)

主引用文献

Schevitz, R.W.,Bach, N.J.,Carlson, D.G.,Chirgadze, N.Y.,Clawson, D.K.,Dillard, R.D.,Draheim, S.E.,Hartley, L.W.,Jones, N.D.,Mihelich, E.D.,Olkowski, J.L.,Snyder, D.W.,Sommers, C.,Wery, J.-P.
Structure-based design of the first potent and selective inhibitor of human non-pancreatic secretory phospholipase A2.
Nat.Struct.Biol., 2:458-465, 1995

PubMed Abstract: A lead compound obtained from a high volume human non-pancreatic secretory phospholipase A2 (hnps-PLA2) screen has been developed into a potent inhibitor using detailed structural knowledge of inhibitor binding to the enzyme active site. Four crystal structures of hnps-PLA2 complexed with a series of increasingly potent indole inhibitors were determined and used as the structural basis for both understanding this binding and providing valuable insights for further development. The application of structure-based drug design has made possible improvements in the binding of this screening lead to the enzyme by nearly three orders of magnitude. Furthermore, the optimized structure (LY311727) displayed 1,500-fold selectivity when assayed against porcine pancreatic s-PLA2.

PubMed: 7664108
DOI: 10.1038/nsb0695-458

実験手法

X-RAY DIFFRACTION (2.8 Å)