1CS8

CRYSTAL STRUCTURE OF PROCATHEPSIN L

1CS8 の概要

• エントリーDOI: 10.2210/pdb1cs8/pdb
• 関連するPDBエントリー: 1CJL
• 分子名称: HUMAN PROCATHEPSIN L (2 entities in total)
• 機能のキーワード: prosegment, propeptide, inhibition, hydrolase
• 由来する生物種: Homo sapiens (human)
• 細胞内の位置: Lysosome: P07711
• タンパク質・核酸の鎖数: 1
• 化学式量合計: 35920.97

構造登録者

Cygler, M.,Coulombe, R. (登録日: 1999-08-17, 公開日: 1999-08-23, 最終更新日: 2021-11-03)

主引用文献

Coulombe, R.,Grochulski, P.,Sivaraman, J.,Menard, R.,Mort, J.S.,Cygler, M.
Structure of human procathepsin L reveals the molecular basis of inhibition by the prosegment.
EMBO J., 15:5492-5503, 1996

PubMed Abstract: Cathepsin L is a member of the papain superfamily of cysteine proteases and, like many other proteases, it is synthesized as an inactive proenzyme. Its prosegment shows little homology to that of procathepsin B, whose structure, the first for a cysteine protease proenzyme, has been determined recently. We report here the 3-D structure of a mutant of human procathepsin L determined at 2.2 A resolution, describe the mode of binding employed by the prosegment and discuss the molecular basis for other possible roles of the prosegment. The N-terminal part of the prosegment is globular and contains three alpha-helices with a small hydrophobic core built around aromatic side chains. This domain packs against a loop on the enzyme's surface, with the aromatic side chain from the prosegment being located in the center of this loop and providing a large contact area. The C-terminal portion of the prosegment assumes an extended conformation and follows along the substrate binding cleft toward the N-terminus of the mature enzyme. The direction of the prosegment in the substrate binding cleft is opposite to that of substrates. The previously described role of the prosegment in the interactions with membranes is supported by the structure of its N-terminal domain. The fold of the prosegment and the mechanism by which it inhibits the enzymatic activity of procathepsin L is similar to that observed in procathepsin B despite differences in length and sequence, suggesting that this mode of inhibition is common to all enzymes from the papain superfamily.

PubMed: 8896443

実験手法

X-RAY DIFFRACTION (1.8 Å)