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9ZXM

DDB1 delta with compound 6

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA damage-binding protein 1polymer85695773.71UniProt (Q16531)Homo sapiens (human)DDB p127 subunit,DNA damage-binding protein a,DDBa,Damage-specific DNA-binding protein 1,HBV X-associated protein 1,XAP-1,UV-damaged DNA-binding factor,UV-damaged DNA-binding protein 1,UV-DDB 1,XPE-binding factor,XPE-BF,Xeroderma pigmentosum group E-complementing protein,XPCe
2B
(A)
(3S,5S)-1-{(4P)-4-(2,2-difluoro-2H-1,3-benzodioxol-4-yl)-3-[(propan-2-yl)oxy]benzene-1-carbonyl}-N-methyl-5-phenylpiperidine-3-carboxamidenon-polymer536.61Chemie (A1C4E)
3C, D, E
(A)
GLYCEROLnon-polymer92.13Chemie (GOL)
PubChem (753)
4F
(A)
waterwater18.0182Chemie (HOH)
Sequence modifications
A: 1 - 393 (UniProt: Q16531)
PDBExternal DatabaseDetails
Met -19-initiating methionine
His -18-expression tag
His -17-expression tag
His -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
Val -12-expression tag
Asp -11-expression tag
Glu -10-expression tag
Glu -9-expression tag
Asn -8-expression tag
Leu -7-expression tag
Tyr -6-expression tag
Phe -5-expression tag
Gln -4-expression tag
Gly -3-expression tag
Gly -2-expression tag
Gly -1-expression tag
Arg 0-expression tag
A: 706 - 1140 (UniProt: Q16531)
PDBExternal DatabaseDetails
Ile 698-linker
Gly 699-linker
Gly 700-linker
Asn 701-linker
Gly 702-linker
Asn 703-linker
Ser 704-linker
Gly 705-linker
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight95773.7
Non-Polymers*Number of molecules4
Total formula weight812.8
All*Total formula weight96586.5
*Water molecules are not included.

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PDB entries from 2026-04-08

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