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9Z08

Isoreticular co-crystal 1 with asymmetrical expanded duplex (31mer) containing separate insert strand with sequence GACGGTAATT

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA (5'-D(P*AP*CP*CP*TP*GP*TP*GP*AP*CP*AP*AP*AP*TP*T*GP*CP*CP*CP*TP*CP*A)-3')polymer216367.11Escherichia coli
2B
(B)
DNA (5'-D(P*TP*CP*TP*GP*AP*GP*GP*GP*CP*AP*AP*TP*TP*TP*GP*TP*CP*AP*CP*AP*G)-3')polymer216478.21Escherichia coli
3C
(C)
Replication initiation proteinpolymer26330749.11UniProt (P03856)Escherichia coliProtein E,Protein rep,Protein F4, Replication Initiator protein RepE54
4D
(E)
DNA (5'-D(P*GP*AP*CP*GP*GP*TP*AP*AP*TP*T)-3')polymer103084.01Escherichia coli
5E
(F)
DNA (5'-D(P*GP*TP*AP*AP*TP*TP*AP*CP*CP*G)-3')polymer103044.01Escherichia coli
6F, G
(C)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
PubChem (888)
Sequence modifications
C: 1 - 251 (UniProt: P03856)
PDBExternal DatabaseDetails
Met -11-initiating methionine
Arg -10-expression tag
Gly -9-expression tag
Ser -8-expression tag
His -7-expression tag
His -6-expression tag
His -5-expression tag
His -4-expression tag
His -3-expression tag
His -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
Pro 118Arg 118conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains5
Total formula weight49722.4
Non-Polymers*Number of molecules2
Total formula weight48.6
All*Total formula weight49771.1
*Water molecules are not included.

251422

PDB entries from 2026-04-01

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