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9YZU

Isoreticular co-crystal 1 with asymmetrical expanded duplex (31mer) containing insert sequence ATGAGTCATA and loaded with mutated Bzip region of GCN4 transcription factor

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA (31-MER)polymer319496.11Escherichia coli
2B
(B)
DNA (31-MER)polymer319567.21Escherichia coli
3C
(C)
Replication initiation proteinpolymer26330749.11UniProt (P03856)Escherichia coliProtein E,Protein rep,Protein F4, Replication Initiator protein RepE54
4D, E, F
(F, D, E)
General control transcription factor GCN4polymer293422.13UniProt (P03069)
Pfam (PF07716)
Saccharomyces cerevisiaeAmino acid biosynthesis regulatory protein,General control protein GCN4
5G, H
(B, C)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
Sequence modifications
C: 1 - 251 (UniProt: P03856)
PDBExternal DatabaseDetails
Met -11-initiating methionine
Arg -10-expression tag
Gly -9-expression tag
Ser -8-expression tag
His -7-expression tag
His -6-expression tag
His -5-expression tag
His -4-expression tag
His -3-expression tag
His -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
Pro 118Arg 118conflict
F, D, E: 1 - 26 (UniProt: P03069)
PDBExternal DatabaseDetails
Lys 27-expression tag
Gln 28-expression tag
Cys 29-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight60078.6
Non-Polymers*Number of molecules2
Total formula weight48.6
All*Total formula weight60127.2
*Water molecules are not included.

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PDB entries from 2026-03-11

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