Loading
PDBj
✖
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9YLR

Nucleosome scFv complex with a nick at SHL +5.3

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Histone H2Apolymer12413388.72UniProt (P84051)
Pfam (PF00125)
Pfam (PF16211)
Drosophila melanogaster (fruit fly)
2C, D
(C, D)
Histone H2Bpolymer12513897.32UniProt (P02283)
Pfam (PF00125)
Drosophila melanogaster (fruit fly)
3E, F
(E, F)
Histone H3polymer13615405.02UniProt (P02299)
Pfam (PF00125)
Drosophila melanogaster (fruit fly)
4G, H
(G, H)
Histone H4polymer10411521.62UniProt (P84040)
Pfam (PF15511)
Drosophila melanogaster (fruit fly)
5I, J
(I, J)
scFv20polymer27429631.72Mus musculus
6K
(K)
DNA (130-MER)polymer13039859.41synthetic construct
7L
(L)
DNA (23-MER)polymer237054.61synthetic construct
8M
(M)
DNA (153-MER)polymer15347497.31synthetic construct
Sequence modifications
C, D: 3 - 124 (UniProt: P02283)
PDBExternal DatabaseDetails
Gly 0-expression tag
Met 1-expression tag
Ile 2-expression tag
E, F: 1 - 136 (UniProt: P02299)
PDBExternal DatabaseDetails
Ser 111Cys 111conflict
G, H: 3 - 104 (UniProt: P84040)
PDBExternal DatabaseDetails
Met 1-initiating methionine
Ile 2-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains13
Total formula weight262099.8
All*Total formula weight262099.8
*Water molecules are not included.

262513

PDB entries from 2026-11-04

PDB statisticsPDBj update infoContact PDBjnumon