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9YL5

Crystal Structure of 6,7-dimethyl-8-ribityllumazine synthase from Bordetella pertussis in complex with 5-amino-6-(D-ribitylamino)uracil

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D, E
(A, B, C, D, E)
6,7-dimethyl-8-ribityllumazine synthasepolymer16317318.55UniProt (Q7VTN4)
Pfam (PF00885)
Bordetella pertussis Tohama IDMRL synthase,LS,Lumazine synthase
2AA, F, G, H, I...
(E, A, B, C, D)
CHLORIDE IONnon-polymer35.518Chemie (CL)
3BA, L, P, T, X
(E, A, B, C, D)
5-NITROSO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONEnon-polymer290.25Chemie (LMZ)
4CA, DA, EA, FA, GA
(A, B, C, D, E)
waterwater18.031Chemie (HOH)
Sequence modifications
A, B, C, D, E: 1 - 155 (UniProt: Q7VTN4)
PDBExternal DatabaseDetails
Met -7-initiating methionine
Ala -6-expression tag
His -5-expression tag
His -4-expression tag
His -3-expression tag
His -2-expression tag
His -1-expression tag
His 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains5
Total formula weight86592.5
Non-Polymers*Number of molecules23
Total formula weight2089.3
All*Total formula weight88681.8
*Water molecules are not included.

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PDB entries from 2025-12-24

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