9YKA
Cryo-EM structure of post-fusion EBV gB in complex with AMMO2 fab
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E (F, H, D) | AMMO2 fab heavy chain | polymer | 133 | 14393.0 | 3 | Homo sapiens (human) | ||
| 2 | B, D, F (G, I, E) | AMMO2 fab light chain | polymer | 214 | 23134.7 | 3 | Homo sapiens (human) | ||
| 3 | G, H, I (A, B, C) | BALF4 | polymer | 734 | 81665.5 | 3 | UniProt (R4R670) Pfam (PF17416) Pfam (PF17417) Pfam (PF00606) | human gammaherpesvirus 4 (Epstein-Barr virus) | Glycoprotein gp110 |
| 4 | J, K, L, M, N... (A, B, C) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 6 | Chemie (NAG) |
Sequence modifications
A, B, C: 1 - 688 (UniProt: R4R670)
A, B, C: 689 - 734 (PDB: 9YKA)
| PDB | External Database | Details |
|---|---|---|
| His 112 | Trp 112 | conflict |
| Arg 113 | Tyr 113 | conflict |
| Arg 193 | Trp 193 | conflict |
| Val 194 | Leu 194 | conflict |
| Glu 195 | Ile 195 | conflict |
| Ala 196 | Trp 196 | conflict |
| Glu 220 | Asp 220 | conflict |
| Gly 428 | Arg 428 | conflict |
| Gly 429 | Arg 429 | conflict |
| Ser 430 | Arg 430 | conflict |
| Gly 431 | Arg 431 | conflict |
| Gly 432 | Arg 432 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 9 |
| Total formula weight | 357579.5 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 1327.2 | |
| All* | Total formula weight | 358906.7 |
