9YAG
TCR-HLA-DQ2.5-glia-w1 complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, F (F, A) | HLA class II histocompatibility antigen, DQ alpha 1 chain | polymer | 183 | 20683.1 | 2 | UniProt (P01909) Pfam (PF00993) Pfam (PF07654) | Homo sapiens (human) | DC-1 alpha chain,DC-alpha,HLA-DCA,MHC class II DQA1 |
| 2 | B, G (G, B) | HLA class II histocompatibility antigen, DQ 2.5 beta chain | polymer | 192 | 22482.4 | 2 | UniProt (B4E328) | Homo sapiens (human) | cDNA FLJ59004, highly similar to HLA class II histocompatibility antigen, DQ(1)beta chain |
| 3 | C, H (H, C) | GLIA-W1 PEPTIDE | polymer | 12 | 1414.6 | 2 | Homo sapiens (human) | ||
| 4 | D, I (I, D) | TCR alpha chain | polymer | 206 | 22619.1 | 2 | Homo sapiens | ||
| 5 | E, J (J, E) | TCR beta chain | polymer | 244 | 27468.5 | 2 | Homo sapiens | ||
| 6 | AA, K, P, Q, R... (E, F, I, J, A...) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 11 | Chemie (NAG) PubChem (24139) | |||
| 7 | L, M, N, O, S... (F, G, I, A) | GLYCEROL | non-polymer | 92.1 | 6 | Chemie (GOL) PubChem (753) | |||
| 8 | BA, CA, DA, EA, FA... (F, G, I, J, A...) | water | water | 18.0 | 40 | Chemie (HOH) |
Sequence modifications
F, A: 1 - 183 (UniProt: P01909)
| PDB | External Database | Details |
|---|---|---|
| Ser 46 | Cys 70 | conflict |
| Cys 74 | Ser 97 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 10 |
| Total formula weight | 189335.3 | |
| Non-Polymers* | Number of molecules | 17 |
| Total formula weight | 2985.9 | |
| All* | Total formula weight | 192321.2 |
