9YAF
TCR-HLA-DQ2.5-glia-a1a complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, F (A, F) | HLA class II histocompatibility antigen, DQ alpha 1 chain | polymer | 183 | 20667.1 | 2 | UniProt (P01909) Pfam (PF00993) Pfam (PF07654) | Homo sapiens (human) | DC-1 alpha chain,DC-alpha,HLA-DCA,MHC class II DQA1 |
| 2 | B, G (B, G) | HLA class II histocompatibility antigen, DQ 2.5 beta chain | polymer | 192 | 22482.4 | 2 | UniProt (B4E328) | Homo sapiens (human) | cDNA FLJ59004, highly similar to HLA class II histocompatibility antigen, DQ(1)beta chain |
| 3 | C, H (C, H) | GLIA-A1a peptide | polymer | 13 | 1440.6 | 2 | Homo sapiens (human) | ||
| 4 | D, I (D, I) | TCR alpha chain | polymer | 206 | 22619.1 | 2 | Homo sapiens (human) | ||
| 5 | E, J (E, J) | TCR beta chain | polymer | 244 | 27468.5 | 2 | Homo sapiens (human) | ||
| 6 | K (K) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 7 | L, N, O, P, U... (A, D, E, I, J) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 7 | Chemie (NAG) PubChem (24139) | |||
| 8 | M, Q, R, S, T (A, F, G) | GLYCEROL | non-polymer | 92.1 | 5 | Chemie (GOL) PubChem (753) | |||
| 9 | AA, BA, CA, DA, X... (F, G, I, J, A...) | water | water | 18.0 | 33 | Chemie (HOH) |
Sequence modifications
A, F: 1 - 183 (UniProt: P01909)
| PDB | External Database | Details |
|---|---|---|
| Ser 46 | Cys 70 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 10 |
| Total formula weight | 189355.2 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 424.4 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 2008.9 | |
| All* | Total formula weight | 191788.6 |
