9Y9Z
Cryo-EM structure of conoid fiber from Toxoplasma gondii (24-nm repeat)
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, AA, AN, B, BN... (A, B, C, D, E...) | CF2, TGME49_258090 | polymer | 954 | 106251.1 | 54 | UniProt (S8GBZ2) | Toxoplasma gondii | |
| 2 | BA, CA, DA, EA, EH... (10, 11, 12, 13, 14...) | CF1, TGME49_222350 | polymer | 410 | 47976.3 | 14 | UniProt (S8GJP0) | Toxoplasma gondii | |
| 3 | AF, BD, BE, BG, BH... (1A, 1C, 1E, 1G, 1I...) | Tubulin alpha chain | polymer | 453 | 50166.6 | 63 | UniProt (P10873) | Toxoplasma gondii | Alpha-tubulin, alpha tubulin TUBA1, TGME49_316400 |
| 4 | AE, AG, AH, BF, CD... (1B, 1D, 1F, 1H, 1J...) | Tubulin beta chain | polymer | 449 | 50119.1 | 57 | UniProt (I7BFC9) | Toxoplasma gondii | beta tubulin, TGME49_266960 |
| 5 | AB, AC, AD, BB, BC... (20, 21, 22, 23, 24...) | Spindle assembly abnormal protein 6 N-terminal domain-containing protein | polymer | 263 | 29530.0 | 41 | UniProt (A0A7J6KDX1) | Toxoplasma gondii | SAS6L, TGME49_301420 |
| 6 | RE, SE, TE, UE, VE... (63, 64, 65, 66, 67...) | CIP3, TGME49_225020 | polymer | 1010 | 114592.6 | 7 | UniProt (S8G5Q1) | Toxoplasma gondii | |
| 7 | FH, GH, HH, IH, JG... (71, 72, 73, 75, 76...) | CF6, TGME49_245640 | polymer | 416 | 46600.6 | 24 | UniProt (A0A086KRX4) | Toxoplasma gondii | |
| 8 | AI, BI, CI, DI, EI... (A1, A2, A3, A4, A5...) | CF4, TGME49_246720 | polymer | 502 | 56022.8 | 9 | UniProt (A0A086KR31) | Toxoplasma gondii | EF hand protein |
| 9 | JI, KI, LI, MI, NI... (B1, B2, B3, B4, B5...) | CF3, TGME49_255895 | polymer | 556 | 62988.6 | 7 | UniProt (S8F3E8) | Toxoplasma gondii | Bax inhibitor 1, related protein |
| 10 | AJ, BJ, CJ, DJ, EJ... (C0, C6, C7, C8, C9...) | CPH1, TGME49_266630 | polymer | 582 | 67410.5 | 28 | UniProt (A0A7J6KB56) | Toxoplasma gondii | Ankyrin repeat-containing protein |
| 11 | RI, SI, TI, UI, VI (C1, C2, C3, C4, C5) | Microtubule associated protein SPM1 | polymer | 351 | 38845.8 | 5 | UniProt (A0A7J6K285) | Toxoplasma gondii | SPM1, TGME49_263520 |
| 12 | AK, AL, BK, BL, CK... (F0, F5, F6, F7, F8...) | PRP, TGME49_291880 | polymer | 783 | 80452.4 | 35 | UniProt (A0A151HK62) | Toxoplasma gondii | |
| 13 | GL, HL, IL, JL, KL... (J1, J2, J3, J4, J5...) | CF5, TGME49_297180 | polymer | 871 | 97829.7 | 7 | UniProt (S8FEB8) | Toxoplasma gondii | CRAL/TRIO domain-containing protein |
| 14 | AM, BM, CM, DM, EM... (K0, K1, K2, K3, K4...) | DCX, TGME49_256030 | polymer | 256 | 29261.4 | 27 | UniProt (B6KAS6) | Toxoplasma gondii | Doublecortin domain-containing protein, TgDCX |
| 15 | AO, AP, AQ, AT, BP... (1I, 2M, 4E, 8E, 3A...) | GUANOSINE-5'-TRIPHOSPHATE | non-polymer | 523.2 | 63 | Chemie (GTP) | |||
| 16 | AR, AU, BO, BQ, BT... (5I, 9I, 1I, 4E, 8E...) | MAGNESIUM ION | non-polymer | 24.3 | 54 | Chemie (MG) | |||
| 17 | AS, BR, BU, CO, CQ... (6N, 5J, 9J, 1J, 4F...) | GUANOSINE-5'-DIPHOSPHATE | non-polymer | 443.2 | 57 | Chemie (GDP) |
Sequence modifications
C1, C2, C3, C4, C5: 1 - 351 (UniProt: A0A7J6K285)
| PDB | External Database | Details |
|---|---|---|
| Arg 93 | Pro 93 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 378 |
| Total formula weight | 22875359.8 | |
| Non-Polymers* | Number of molecules | 174 |
| Total formula weight | 59535.3 | |
| All* | Total formula weight | 22934895.0 |
